Discussions : BioData Catalyst

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NHLBI BioData Catalyst (BDC) Forums

Announcements 23

BDC Video Now Available

Posted by Amber Voght, about 2 years ago
Last Reply by Amber Voght about 2 years ago
Now Available: 2025-01-15 BioData Catalyst Ecosystem Release Notes

Posted by Paul Kerr, 12 days ago
Last Reply by Paul Kerr 12 days ago
Now Available: 2024-10-21 BioData Catalyst Ecosystem Release Notes

Posted by Paul Kerr, 3 months ago
Last Reply by Paul Kerr 3 months ago
Now Available: 2024-07-02 BioData Catalyst Ecosystem Release Notes

Posted by Paul Kerr, 7 months ago
Last Reply by Paul Kerr 7 months ago
Now Available: 2024-04-01 BioData Catalyst Ecosystem Release Notes

Posted by Paul Kerr, 10 months ago
Last Reply by Paul Kerr 10 months ago

See all 23 topics

Events 17

August 2023 Community Hours: Researcher Showcase with TOPMed Fellow Matthew Goodman, PhD

Posted by Kaleena Narwani, over 1 year ago
Last Reply by Kaleena Narwani over 1 year ago
May 2023 Community Hours: Newly Published Apps and Workflows

Posted by Amber Voght, over 1 year ago
Last Reply by Amber Voght over 1 year ago
April 2023 Community Hours: What to do While Waiting for Funding

Posted by Amber Voght, over 1 year ago
Last Reply by Amber Voght over 1 year ago
Feb 22 2023 Community Hours: Cloud Workflow Optimization and Researcher Showcase

Posted by Amber Voght, almost 2 years ago
Last Reply by Amber Voght over 1 year ago
March 15 2023 Community Hours: Citations and Publications

Posted by Amber Voght, over 1 year ago
Last Reply by Amber Voght over 1 year ago

See all 17 topics

Community Forum 9

GWAS with Multinomial Regression

Posted by Cera Fisher, 6 months ago
Last Reply by Cera Fisher 6 months ago
Help with creating a CWL tool

Posted by Cera Fisher, 6 months ago
Last Reply by Cera Fisher 6 months ago
Multicollinearity among your covariates

Posted by Taskeen molin, 8 months ago
Last Reply by Taskeen molin 8 months ago
Meta-analyzing GENESIS results with MetaSKAT

Posted by Brandon Lê, over 1 year ago
Last Reply by Brandon Lê over 1 year ago
Ideas for open SDoH datasets

Posted by David Roberson, over 1 year ago
Last Reply by David Roberson over 1 year ago

See all 9 topics

Community Hours 42

The 2025 Top Community Hours Videos

Posted by Nathalie Volkheimer, about 1 month ago
Last Reply by Nathalie Volkheimer about 1 month ago
December Community Hours: Materials and Notes from 12/18/2025

Posted by Nathalie Volkheimer, about 1 month ago
Last Reply by Nathalie Volkheimer about 1 month ago
November Community Hours: Materials and Notes from 11/20/2024

Posted by Nathalie Volkheimer, 2 months ago
Last Reply by Nathalie Volkheimer 2 months ago
September Community Hours: Materials and Notes from 9/18/2024

Posted by Nathalie Volkheimer, 4 months ago
Last Reply by Nathalie Volkheimer 4 months ago
August Community Hours: Materials and Notes from 8/21/2024

Posted by Nathalie Volkheimer, 5 months ago
Last Reply by Nathalie Volkheimer 5 months ago

See all 42 topics

RMIP Resource Hub 1

We've moved

Posted by Jeran Stratford, 7 months ago
Last Reply by Jeran Stratford 7 months ago

HeartShare on BDC 10

Q & A: How can I get live support with analysis on BDC?

Posted by Nathalie Volkheimer, 17 days ago
Last Reply by Nathalie Volkheimer 17 days ago
Q & A: How do you combine different data types from different data sets so analyses can be performed?

Posted by Nathalie Volkheimer, 22 days ago
Last Reply by Nathalie Volkheimer 22 days ago
Q & A: Can I bring my own tools and algorithms to BDC?

Posted by Nathalie Volkheimer, 22 days ago
Last Reply by Nathalie Volkheimer 22 days ago
Q & A: How do I create a BDC account without an eRA Commons ID?

Posted by Nathalie Volkheimer, 3 months ago
Last Reply by Nathalie Volkheimer 3 months ago
Orientation Q&A: What are the compute and storage costs? How can I minimize costs?

Posted by Nathalie Volkheimer, 5 months ago
Last Reply by Nathalie Volkheimer 5 months ago

See all 10 topics

TOPMed Fellows 2

Issue with Overlapping Variants in TOPMed Cohorts Using WGS Data

Posted by Yasaman Jamalipour Soofi, 5 months ago
Last Reply by Yasaman Jamalipour Soofi 5 months ago
TOPMed Fellowship Orientation

Posted by Amber Voght, 8 months ago
Last Reply by Amber Voght 8 months ago

RECOVER on BDC 0

RMIP Resource Hub

Welcome! Start here. 9

Frequently Asked Questions

Posted by Jeran Stratford, 6 months ago
Last Reply by Jeran Stratford 6 months ago
Welcome!

Posted by Jeran Stratford, 8 months ago
Last Reply by Jeran Stratford 8 months ago
RMIP - Data Management Plan

Posted by Jeran Stratford, 9 months ago
Last Reply by Jeran Stratford 9 months ago
Data Management Core Office Hours

Posted by Jeran Stratford, 6 months ago
Last Reply by Jeran Stratford 6 months ago
BDC Orientation Recording Now Available

Posted by Jeran Stratford, 6 months ago
Last Reply by Jeran Stratford 6 months ago

See all 9 topics

Phase 1 - Preparation 2

De-Identification Guidance

Posted by Mike Enger, 8 months ago
Last Reply by Jeran Stratford 4 months ago
Supporting Documentation Guidance

Posted by Mike Enger, 7 months ago
Last Reply by Mike Enger 7 months ago

Phase 2 - Aggregation 5

File Tagging Guidance

Posted by Mike Enger, 7 months ago
Last Reply by Mike Enger 7 months ago
Uploading Data to BDC

Posted by Mike Enger, 7 months ago
Last Reply by Mike Enger 7 months ago
What is Raw Data?

Posted by Mike Enger, 7 months ago
Last Reply by Mike Enger 7 months ago
File Naming Guidance

Posted by Mike Enger, 8 months ago
Last Reply by Mike Enger 8 months ago
RMIP Data Landscape Codes

Posted by Jeran Stratford, 8 months ago
Last Reply by Jeran Stratford 8 months ago

Phase 3 - Harmonization 1

Harmonizing Data on BDC

Posted by Mike Enger, 7 months ago
Last Reply by Mike Enger 7 months ago

Documents and Templates 6

Documents and Templates

Posted by Jeran Stratford, 8 months ago
Last Reply by Jeran Stratford 8 months ago
Template - Seven Bridges Project

Posted by Mike Enger, 8 months ago
Last Reply by Mike Enger 8 months ago
Template - Data Manifest

Posted by Jeran Stratford, 8 months ago
Last Reply by Jeran Stratford 8 months ago
Template - Sample Manifest

Posted by Jeran Stratford, 8 months ago
Last Reply by Jeran Stratford 8 months ago
Template - Data Dictionary

Posted by Jeran Stratford, 8 months ago
Last Reply by Jeran Stratford 8 months ago

See all 6 topics

Tutorials 10

Suggest a Tutorial Video

Posted by Mike Enger, 5 months ago
Last Reply by Mike Enger 5 months ago
Tutorials Index

Posted by Jeran Stratford, 8 months ago
Last Reply by Jeran Stratford 8 months ago
Citing BioData Catalyst in Manuscripts

Posted by Jeran Stratford, 3 months ago
Last Reply by Jeran Stratford 3 months ago
Tutorial Video - File Tagging

Posted by Mike Enger, 5 months ago
Last Reply by Mike Enger 5 months ago
Billing on BDC

Posted by Mike Enger, 7 months ago
Last Reply by Mike Enger 7 months ago

See all 10 topics

Applications 12

Applications

Posted by Mike Enger, 7 months ago
Last Reply by Mike Enger 7 months ago
Application – File Tagging Tool

Posted by Mike Enger, 3 months ago
Last Reply by Mike Enger 3 months ago
Application – Metadata Manifest Generator

Posted by Mike Enger, 3 months ago
Last Reply by Mike Enger 3 months ago
Application - Bulk RNAseq Harmonization Workflow

Posted by Mike Enger, 7 months ago
Last Reply by Mike Enger 7 months ago
Application - Sanger Sequencing Harmonization Tool

Posted by Mike Enger, 7 months ago
Last Reply by Mike Enger 7 months ago

See all 12 topics

Data Standards 7

Data Standards

Posted by Jeran Stratford, 7 months ago
Last Reply by Jeran Stratford 7 months ago
Data Standards For Clinical and Preclinical Data

Posted by Jeran Stratford, 9 months ago
Last Reply by Jeran Stratford 9 months ago
Data Standards For Imaging

Posted by Jeran Stratford, 9 months ago
Last Reply by Jeran Stratford 9 months ago
Data Standards For Electrophysiology Assays

Posted by Jeran Stratford, 9 months ago
Last Reply by Jeran Stratford 9 months ago
Data Standards For Laboratory Assays

Posted by Jeran Stratford, 9 months ago
Last Reply by Jeran Stratford 9 months ago

See all 7 topics

RMIP - BioData Catalyst Monthly Updates 2

Welcome to the Updates Forum

Posted by Mike Enger, 4 months ago
Last Reply by Mike Enger 4 months ago
RMIP Research Spotlight

Posted by Jeran Stratford, 2 months ago
Last Reply by Jeran Stratford 2 months ago

Workshops & Presentations

Howard University Workshops 6

2023 Spring Bioinformatics Course

Posted by David Roberson, almost 2 years ago
Last Reply by David Roberson almost 2 years ago
Feedback Survey

Posted by Amber Voght, about 2 years ago
Last Reply by Amber Voght about 2 years ago
Day 2 Recording

Posted by Amber Voght, about 2 years ago
Last Reply by Amber Voght about 2 years ago
Day 1 Recording

Posted by Amber Voght, about 2 years ago
Last Reply by Amber Voght about 2 years ago
Welcome - Introductions, Slides, and Meeting Info

Posted by Amber Voght, about 2 years ago
Last Reply by Aarthi Krishnan about 2 years ago

See all 6 topics

CHARGE Workshop, April 27 3

Welcome!

Posted by Amber Voght, almost 3 years ago
Last Reply by Amber Voght almost 3 years ago
Full Workshop Materials

Posted by Amber Voght, over 2 years ago
Last Reply by Amber Voght over 2 years ago
Getting added to the Seven Bridges CHARGE billing group

Posted by David Roberson, almost 3 years ago
Last Reply by David Roberson almost 3 years ago

NDSA Workshop: Starting Cloud-Based Research on BDC 9

Welcome and Introductions

Posted by Amber Voght, over 1 year ago
Last Reply by Widodo Samyono over 1 year ago
Slides and Meeting Info

Posted by Amber Voght, over 1 year ago
Last Reply by David Roberson over 1 year ago
Resources for eRA Commons and dbGaP Access

Posted by Cera Fisher, over 1 year ago
Last Reply by Cera Fisher over 1 year ago
Ideas for open SDoH datasets

Posted by David Roberson, over 1 year ago
Last Reply by David Roberson over 1 year ago
New software tools?

Posted by David Roberson, over 1 year ago
Last Reply by David Roberson over 1 year ago

See all 9 topics

PRIDE 1

Introduction to BDC, 06/13/2023

Posted by Amber Voght, over 1 year ago
Last Reply by Amber Voght over 1 year ago

HeartShare Northwestern 1

Northwestern Onboarding Module 01: Platform Essentials

Posted by David Roberson, over 1 year ago
Last Reply by David Roberson over 1 year ago

PCGC Fellows 4

Seven Bridges Office Hours

Posted by Amber Voght, over 1 year ago
Last Reply by Amber Voght over 1 year ago
Request Pilot Credits

Posted by Amber Voght, over 1 year ago
Last Reply by Archana Rai over 1 year ago
Introductory Session, 2023-2024 Cohort

Posted by Amber Voght, over 1 year ago
Last Reply by Cera Fisher over 1 year ago
Seven Bridges Account Instructions

Posted by Amber Voght, over 1 year ago
Last Reply by Amber Voght over 1 year ago

ASHG 2024 Interactive Workshop: Elevating Education 4

Interactive Component: Data Exploration

Posted by Amber Voght, 3 months ago
Last Reply by Amber Voght 3 months ago
Success Story: BDC in the Classroom

Posted by Amber Voght, 3 months ago
Last Reply by Amber Voght 3 months ago
Register for BDC's Analysis Platform

Posted by Amber Voght, 3 months ago
Last Reply by Amber Voght 3 months ago
Workshop Slides

Posted by Amber Voght, 3 months ago
Last Reply by Amber Voght 3 months ago