BioData Catalyst

Announcements 23

• BDC Video Now Available
  Posted by Amber Voght, about 2 years ago

  Last Reply by Amber Voght about 2 years ago
• Now Available: 2025-01-15 BioData Catalyst Ecosystem Release Notes
  Posted by Paul Kerr, about 2 months ago

  Last Reply by Paul Kerr about 2 months ago
• Now Available: 2024-10-21 BioData Catalyst Ecosystem Release Notes
  Posted by Paul Kerr, 5 months ago

  Last Reply by Paul Kerr 5 months ago
• Now Available: 2024-07-02 BioData Catalyst Ecosystem Release Notes
  Posted by Paul Kerr, 8 months ago

  Last Reply by Paul Kerr 8 months ago
• Now Available: 2024-04-01 BioData Catalyst Ecosystem Release Notes
  Posted by Paul Kerr, 11 months ago

  Last Reply by Paul Kerr 11 months ago
See all 23 topics

Events 17

• August 2023 Community Hours: Researcher Showcase with TOPMed Fellow Matthew Goodman, PhD
  Posted by Kaleena Narwani, over 1 year ago

  Last Reply by Kaleena Narwani over 1 year ago
• May 2023 Community Hours: Newly Published Apps and Workflows
  Posted by Amber Voght, almost 2 years ago

  Last Reply by Amber Voght almost 2 years ago
• April 2023 Community Hours: What to do While Waiting for Funding
  Posted by Amber Voght, almost 2 years ago

  Last Reply by Amber Voght almost 2 years ago
• Feb 22 2023 Community Hours: Cloud Workflow Optimization and Researcher Showcase
  Posted by Amber Voght, about 2 years ago

  Last Reply by Amber Voght almost 2 years ago
• March 15 2023 Community Hours: Citations and Publications
  Posted by Amber Voght, almost 2 years ago

  Last Reply by Amber Voght almost 2 years ago
See all 17 topics

Community Forum 9

• GWAS with Multinomial Regression
  Posted by Cera Fisher, 7 months ago

  Last Reply by Cera Fisher 7 months ago
• Help with creating a CWL tool
  Posted by Cera Fisher, 7 months ago

  Last Reply by Cera Fisher 7 months ago
• Multicollinearity among your covariates
  Posted by Taskeen molin, 9 months ago

  Last Reply by Taskeen molin 9 months ago
• Meta-analyzing GENESIS results with MetaSKAT
  Posted by Brandon Lê, over 1 year ago

  Last Reply by Brandon Lê over 1 year ago
• Ideas for open SDoH datasets
  Posted by David Roberson, over 1 year ago

  Last Reply by David Roberson over 1 year ago
See all 9 topics

Community Hours 42

• The 2025 Top Community Hours Videos
  Posted by Nathalie Volkheimer, 2 months ago

  Last Reply by Nathalie Volkheimer 2 months ago
• December Community Hours: Materials and Notes from 12/18/2025
  Posted by Nathalie Volkheimer, 2 months ago

  Last Reply by Nathalie Volkheimer 2 months ago
• November Community Hours: Materials and Notes from 11/20/2024
  Posted by Nathalie Volkheimer, 4 months ago

  Last Reply by Nathalie Volkheimer 4 months ago
• September Community Hours: Materials and Notes from 9/18/2024
  Posted by Nathalie Volkheimer, 5 months ago

  Last Reply by Nathalie Volkheimer 5 months ago
• August Community Hours: Materials and Notes from 8/21/2024
  Posted by Nathalie Volkheimer, 6 months ago

  Last Reply by Nathalie Volkheimer 6 months ago
See all 42 topics

RMIP Resource Hub 1

• We've moved
  Posted by Jeran Stratford, 8 months ago

  Last Reply by Jeran Stratford 8 months ago

HeartShare on BDC 10

• Q & A: How can I get live support with analysis on BDC?
  Posted by Nathalie Volkheimer, about 2 months ago

  Last Reply by Nathalie Volkheimer about 2 months ago
• Q & A: How do you combine different data types from different data sets so analyses can be performed?
  Posted by Nathalie Volkheimer, about 2 months ago

  Last Reply by Nathalie Volkheimer about 2 months ago
• Q & A: Can I bring my own tools and algorithms to BDC?
  Posted by Nathalie Volkheimer, about 2 months ago

  Last Reply by Nathalie Volkheimer about 2 months ago
• Q & A: How do I create a BDC account without an eRA Commons ID?
  Posted by Nathalie Volkheimer, 4 months ago

  Last Reply by Nathalie Volkheimer 4 months ago
• Orientation Q&A: What are the compute and storage costs? How can I minimize costs?
  Posted by Nathalie Volkheimer, 6 months ago

  Last Reply by Nathalie Volkheimer 6 months ago
See all 10 topics

TOPMed Fellows 2

• Issue with Overlapping Variants in TOPMed Cohorts Using WGS Data
  Posted by Yasaman Jamalipour Soofi, 6 months ago

  Last Reply by Yasaman Jamalipour Soofi 6 months ago
• TOPMed Fellowship Orientation
  Posted by Amber Voght, 10 months ago

  Last Reply by Amber Voght 10 months ago

RECOVER on BDC 0

Welcome! Start here. 9

• Frequently Asked Questions
  Posted by Jeran Stratford, 7 months ago

  Last Reply by Jeran Stratford 7 months ago
• Welcome!
  Posted by Jeran Stratford, 9 months ago

  Last Reply by Jeran Stratford 9 months ago
• RMIP - Data Management Plan
  Posted by Jeran Stratford, 10 months ago

  Last Reply by Jeran Stratford 10 months ago
• Data Management Core Office Hours
  Posted by Jeran Stratford, 7 months ago

  Last Reply by Jeran Stratford 7 months ago
• BDC Orientation Recording Now Available
  Posted by Jeran Stratford, 7 months ago

  Last Reply by Jeran Stratford 7 months ago
See all 9 topics

Phase 1 - Preparation 2

• De-Identification Guidance
  Posted by Mike Enger, 9 months ago

  Last Reply by Jeran Stratford 5 months ago
• Supporting Documentation Guidance
  Posted by Mike Enger, 8 months ago

  Last Reply by Mike Enger 8 months ago

Phase 2 - Aggregation 5

• File Tagging Guidance
  Posted by Mike Enger, 8 months ago

  Last Reply by Mike Enger 8 months ago
• Uploading Data to BDC
  Posted by Mike Enger, 9 months ago

  Last Reply by Mike Enger 9 months ago
• What is Raw Data?
  Posted by Mike Enger, 9 months ago

  Last Reply by Mike Enger 9 months ago
• File Naming Guidance
  Posted by Mike Enger, 9 months ago

  Last Reply by Mike Enger 9 months ago
• RMIP Data Landscape Codes
  Posted by Jeran Stratford, 9 months ago

  Last Reply by Jeran Stratford 9 months ago

Phase 3 - Harmonization 1

• Harmonizing Data on BDC
  Posted by Mike Enger, 8 months ago

  Last Reply by Mike Enger 8 months ago

Documents and Templates 6

• Documents and Templates
  Posted by Jeran Stratford, 9 months ago

  Last Reply by Jeran Stratford 9 months ago
• Template - Seven Bridges Project
  Posted by Mike Enger, 9 months ago

  Last Reply by Mike Enger 9 months ago
• Template - Data Manifest
  Posted by Jeran Stratford, 9 months ago

  Last Reply by Jeran Stratford 9 months ago
• Template - Sample Manifest
  Posted by Jeran Stratford, 9 months ago

  Last Reply by Jeran Stratford 9 months ago
• Template - Data Dictionary
  Posted by Jeran Stratford, 9 months ago

  Last Reply by Jeran Stratford 9 months ago
See all 6 topics

Tutorials 10

• Suggest a Tutorial Video
  Posted by Mike Enger, 6 months ago

  Last Reply by Mike Enger 6 months ago
• Tutorials Index
  Posted by Jeran Stratford, 9 months ago

  Last Reply by Jeran Stratford 9 months ago
• Citing BioData Catalyst in Manuscripts
  Posted by Jeran Stratford, 4 months ago

  Last Reply by Jeran Stratford 4 months ago
• Tutorial Video - File Tagging
  Posted by Mike Enger, 6 months ago

  Last Reply by Mike Enger 6 months ago
• Billing on BDC
  Posted by Mike Enger, 8 months ago

  Last Reply by Mike Enger 8 months ago
See all 10 topics

Applications 12

• Applications
  Posted by Mike Enger, 8 months ago

  Last Reply by Mike Enger 8 months ago
• Application – File Tagging Tool
  Posted by Mike Enger, 5 months ago

  Last Reply by Mike Enger 5 months ago
• Application – Metadata Manifest Generator
  Posted by Mike Enger, 5 months ago

  Last Reply by Mike Enger 5 months ago
• Application - Bulk RNAseq Harmonization Workflow
  Posted by Mike Enger, 9 months ago

  Last Reply by Mike Enger 9 months ago
• Application - Sanger Sequencing Harmonization Tool
  Posted by Mike Enger, 9 months ago

  Last Reply by Mike Enger 9 months ago
See all 12 topics

Data Standards 7

• Data Standards
  Posted by Jeran Stratford, 8 months ago

  Last Reply by Jeran Stratford 8 months ago
• Data Standards For Clinical and Preclinical Data
  Posted by Jeran Stratford, 10 months ago

  Last Reply by Jeran Stratford 10 months ago
• Data Standards For Imaging
  Posted by Jeran Stratford, 10 months ago

  Last Reply by Jeran Stratford 10 months ago
• Data Standards For Electrophysiology Assays
  Posted by Jeran Stratford, 10 months ago

  Last Reply by Jeran Stratford 10 months ago
• Data Standards For Laboratory Assays
  Posted by Jeran Stratford, 10 months ago

  Last Reply by Jeran Stratford 10 months ago
See all 7 topics

RMIP - BioData Catalyst Monthly Updates 2

• Welcome to the Updates Forum
  Posted by Mike Enger, 6 months ago

  Last Reply by Mike Enger 6 months ago
• RMIP Research Spotlight
  Posted by Jeran Stratford, 3 months ago

  Last Reply by Jeran Stratford 3 months ago

Howard University Workshops 6

• 2023 Spring Bioinformatics Course
  Posted by David Roberson, about 2 years ago

  Last Reply by David Roberson about 2 years ago
• Feedback Survey
  Posted by Amber Voght, over 2 years ago

  Last Reply by Amber Voght over 2 years ago
• Day 2 Recording
  Posted by Amber Voght, over 2 years ago

  Last Reply by Amber Voght over 2 years ago
• Day 1 Recording
  Posted by Amber Voght, over 2 years ago

  Last Reply by Amber Voght over 2 years ago
• Welcome - Introductions, Slides, and Meeting Info
  Posted by Amber Voght, over 2 years ago

  Last Reply by Aarthi Krishnan over 2 years ago
See all 6 topics

CHARGE Workshop, April 27 3

• Welcome!
  Posted by Amber Voght, almost 3 years ago

  Last Reply by Amber Voght almost 3 years ago
• Full Workshop Materials
  Posted by Amber Voght, almost 3 years ago

  Last Reply by Amber Voght almost 3 years ago
• Getting added to the Seven Bridges CHARGE billing group
  Posted by David Roberson, almost 3 years ago

  Last Reply by David Roberson almost 3 years ago

NDSA Workshop: Starting Cloud-Based Research on BDC 9

• Welcome and Introductions
  Posted by Amber Voght, almost 2 years ago

  Last Reply by Widodo Samyono over 1 year ago
• Slides and Meeting Info
  Posted by Amber Voght, almost 2 years ago

  Last Reply by David Roberson over 1 year ago
• Resources for eRA Commons and dbGaP Access
  Posted by Cera Fisher, over 1 year ago

  Last Reply by Cera Fisher over 1 year ago
• Ideas for open SDoH datasets
  Posted by David Roberson, over 1 year ago

  Last Reply by David Roberson over 1 year ago
• New software tools?
  Posted by David Roberson, over 1 year ago

  Last Reply by David Roberson over 1 year ago
See all 9 topics

PRIDE 1

• Introduction to BDC, 06/13/2023
  Posted by Amber Voght, over 1 year ago

  Last Reply by Amber Voght over 1 year ago

HeartShare Northwestern 1

• Northwestern Onboarding Module 01: Platform Essentials
  Posted by David Roberson, over 1 year ago

  Last Reply by David Roberson over 1 year ago

PCGC Fellows 4

• Seven Bridges Office Hours
  Posted by Amber Voght, over 1 year ago

  Last Reply by Amber Voght over 1 year ago
• Request Pilot Credits
  Posted by Amber Voght, over 1 year ago

  Last Reply by Archana Rai over 1 year ago
• Introductory Session, 2023-2024 Cohort
  Posted by Amber Voght, over 1 year ago

  Last Reply by Cera Fisher over 1 year ago
• Seven Bridges Account Instructions
  Posted by Amber Voght, over 1 year ago

  Last Reply by Amber Voght over 1 year ago

ASHG 2024 Interactive Workshop: Elevating Education 4

• Interactive Component: Data Exploration
  Posted by Amber Voght, 4 months ago

  Last Reply by Amber Voght 4 months ago
• Success Story: BDC in the Classroom
  Posted by Amber Voght, 4 months ago

  Last Reply by Amber Voght 4 months ago
• Register for BDC's Analysis Platform
  Posted by Amber Voght, 4 months ago

  Last Reply by Amber Voght 4 months ago
• Workshop Slides
  Posted by Amber Voght, 4 months ago

  Last Reply by Amber Voght 4 months ago