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RMIP Data Landscape Codes

Nucleotides 

Data Label

Data Type

scRNASingle cell RNA sequencing
RNAseqBulk sample RNA sequencing
scDNASingle cell DNA sequencing
WGSWhole genome DNA sequencing
GUIDEseqGenome-wide, Unbiased Identification of DSBs Enabled by sequencing
ATACseqAssay for Transposase-Accessible Chromatin with sequencing
SangerSanger sequencing
RTqPCRReal Time Quantitative Polymerase Chain Reaction
TapestriInsertion site validation
BionanoOptical genome mapping


Small Molecule

Data Label
Data Type
metabolomeMetabolomic data
lipidomeLipidomic data
secretomeSecretomic data
proteomeProteomic Data
CyTOFSingle cell mass cytometry


Imaging

Data LabelData Type
phagoPhagocytosis features
MRIMRI Imaging
ocularOcular Imaging
echoEchocardiogram
microscopyLight microscopy
karyotypeKaryotype imaging


Electrophysiology

Data LabelData Type
TERTransepithelial Resistance
TECTransepithelial capacitance
MaestroElectrophysiology


Laboratory Assays

Data LabelData Type
viabilityCell viability
MAMacrophage Activation
MPMacrophage Polarization
lineageMulti-lineage differentiation
cytokineCytokine panel
ISImmunostaining
IBImmunoblots


Clinical and Preclinical Data

Data LabelData Type
preclinicalPreclinical (animal study) observations, phenotypes, and laboratory measurements
clinicalClinical observations, phenotypes, and laboratory measurement
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