The Sanger Sequencing Harmonization Tool converts Sanger Sequencing data from AB1 files into FASTA files and generates a report about the sequencing data.
Inputs: Data inputs include the AB1 file and several string values to indicate sample information that will be added to the definition line of the resulting FASTA file.
Outputs: This application outputs3 files: the converted FASTA file; a PDF report of the Sanger read; and an HTML report of the Sanger read. The HTML and PDF reports include an image of the Sanger read’s chromatogram. The FASTA file output format complies with the harmonized format specified in the data management plan.
Link to Application: A link to this application will be posted soon.
Mike Enger
The Sanger Sequencing Harmonization Tool converts Sanger Sequencing data from AB1 files into FASTA files and generates a report about the sequencing data.
Inputs: Data inputs include the AB1 file and several string values to indicate sample information that will be added to the definition line of the resulting FASTA file.
Outputs: This application outputs 3 files: the converted FASTA file; a PDF report of the Sanger read; and an HTML report of the Sanger read. The HTML and PDF reports include an image of the Sanger read’s chromatogram. The FASTA file output format complies with the harmonized format specified in the data management plan.
Link to Application: A link to this application will be posted soon.