The MultiQC Extract Workflow pulls key metrics from a batch of MultiQC results to help investigators review their FastQC analysis.
Inputs: This workflow requires an input directory with an equal number of FastQ files and MultiQC data ZIP files.
Outputs: This workflow outputs a single CSV file with the extracted results from MultiQC data ZIP files. Results from multiple runs will appear in the same CSV file as different rows.
Mike Enger
The MultiQC Extract Workflow pulls key metrics from a batch of MultiQC results to help investigators review their FastQC analysis.
Inputs: This workflow requires an input directory with an equal number of FastQ files and MultiQC data ZIP files.
Outputs: This workflow outputs a single CSV file with the extracted results from MultiQC data ZIP files. Results from multiple runs will appear in the same CSV file as different rows.
Link to Workflow:
https://platform.sb.biodatacatalyst.nhlbi.nih.gov/public/apps/jkstratforddev/rmip-apps-and-workflows/multiqc-extract